Reticulation-visible networks

August 21, 2015 ยท The Ethereal ยท ๐Ÿ› Advances in Applied Mathematics

๐Ÿ”ฎ THE ETHEREAL: The Ethereal
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Authors Magnus Bordewich, Charles Semple arXiv ID 1508.05424 Category math.CO: Combinatorics Cross-listed cs.DS Citations 33 Venue Advances in Applied Mathematics Last Checked 1 month ago
Abstract
Let $X$ be a finite set, $\mathcal N$ be a reticulation-visible network on $X$, and $\mathcal T$ be a rooted binary phylogenetic tree. We show that there is a polynomial-time algorithm for deciding whether or not $\mathcal N$ displays $\mathcal T$. Furthermore, for all $|X|\ge 1$, we show that $\mathcal N$ has at most $8|X|-7$ vertices in total and at most $3|X|-3$ reticulation vertices, and that these upper bounds are sharp.
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