Efficiently Finding All Maximal $α$-gapped Repeats

September 30, 2015 · Declared Dead · 🏛 arXiv.org

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Authors Paweł Gawrychowski, Tomohiro I, Shunsuke Inenaga, Dominik Köppl, Florin Manea arXiv ID 1509.09237 Category cs.DS: Data Structures & Algorithms Citations 13 Venue arXiv.org Last Checked 3 months ago
Abstract
For $α\geq 1$, an $α$-gapped repeat in a word $w$ is a factor $uvu$ of $w$ such that $|uv|\leq α|u|$; the two factors $u$ in such a repeat are called arms, while the factor $v$ is called gap. Such a repeat is called maximal if its arms cannot be extended simultaneously with the same symbol to the right or, respectively, to the left. In this paper we show that the number of maximal $α$-gapped repeats that may occur in a word is upper bounded by $18αn$. This allows us to construct an algorithm finding all the maximal $α$-gapped repeats of a word in $O(αn)$; this is optimal, in the worst case, as there are words that have $Θ(αn)$ maximal $α$-gapped repeats. Our techniques can be extended to get comparable results in the case of $α$-gapped palindromes, i.e., factors $uvu^\mathrm{T}$ with $|uv|\leq α|u|$.
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