Efficiently Finding All Maximal $α$-gapped Repeats
September 30, 2015 · Declared Dead · 🏛 arXiv.org
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Authors
Paweł Gawrychowski, Tomohiro I, Shunsuke Inenaga, Dominik Köppl, Florin Manea
arXiv ID
1509.09237
Category
cs.DS: Data Structures & Algorithms
Citations
13
Venue
arXiv.org
Last Checked
3 months ago
Abstract
For $α\geq 1$, an $α$-gapped repeat in a word $w$ is a factor $uvu$ of $w$ such that $|uv|\leq α|u|$; the two factors $u$ in such a repeat are called arms, while the factor $v$ is called gap. Such a repeat is called maximal if its arms cannot be extended simultaneously with the same symbol to the right or, respectively, to the left. In this paper we show that the number of maximal $α$-gapped repeats that may occur in a word is upper bounded by $18αn$. This allows us to construct an algorithm finding all the maximal $α$-gapped repeats of a word in $O(αn)$; this is optimal, in the worst case, as there are words that have $Θ(αn)$ maximal $α$-gapped repeats. Our techniques can be extended to get comparable results in the case of $α$-gapped palindromes, i.e., factors $uvu^\mathrm{T}$ with $|uv|\leq α|u|$.
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