On the Weighted Quartet Consensus problem

October 03, 2016 Β· Declared Dead Β· πŸ› Annual Symposium on Combinatorial Pattern Matching

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Authors Manuel Lafond, CΓ©line Scornavacca arXiv ID 1610.00505 Category cs.DS: Data Structures & Algorithms Citations 26 Venue Annual Symposium on Combinatorial Pattern Matching Last Checked 3 months ago
Abstract
In phylogenetics, the consensus problem consists in summarizing a set of phylogenetic trees that all classify the same set of species into a single tree. Several definitions of consensus exist in the literature; in this paper we focus on the Weighted Quartet Consensus problem, a problem with unknown complexity status so far. Here we prove that the Weighted Quartet Consensus problem is NP-hard and we give a 1/2-factor approximation for this problem. During the process, we propose a derandomization procedure of a previously known randomized 1/3-factor approximation. We also investigate the fixed-parameter tractability of this problem.
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