On the Weighted Quartet Consensus problem
October 03, 2016 Β· Declared Dead Β· π Annual Symposium on Combinatorial Pattern Matching
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Authors
Manuel Lafond, CΓ©line Scornavacca
arXiv ID
1610.00505
Category
cs.DS: Data Structures & Algorithms
Citations
26
Venue
Annual Symposium on Combinatorial Pattern Matching
Last Checked
3 months ago
Abstract
In phylogenetics, the consensus problem consists in summarizing a set of phylogenetic trees that all classify the same set of species into a single tree. Several definitions of consensus exist in the literature; in this paper we focus on the Weighted Quartet Consensus problem, a problem with unknown complexity status so far. Here we prove that the Weighted Quartet Consensus problem is NP-hard and we give a 1/2-factor approximation for this problem. During the process, we propose a derandomization procedure of a previously known randomized 1/3-factor approximation. We also investigate the fixed-parameter tractability of this problem.
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