Performance of group testing algorithms with near-constant tests-per-item
November 21, 2016 Β· Declared Dead Β· π IEEE Transactions on Information Theory
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Authors
Oliver Johnson, Matthew Aldridge, Jonathan Scarlett
arXiv ID
1612.07122
Category
cs.IT: Information Theory
Cross-listed
math.PR
Citations
75
Venue
IEEE Transactions on Information Theory
Last Checked
5 months ago
Abstract
We consider the nonadaptive group testing with N items, of which $K = Ξ(N^ΞΈ)$ are defective. We study a test design in which each item appears in nearly the same number of tests. For each item, we independently pick L tests uniformly at random with replacement, and place the item in those tests. We analyse the performance of these designs with simple and practical decoding algorithms in a range of sparsity regimes, and show that the performance is consistently improved in comparison with standard Bernoulli designs. We show that our new design requires 23% fewer tests than a Bernoulli design when paired with the simple decoding algorithms known as COMP and DD. This gives the best known nonadaptive group testing performance for $ΞΈ> 0.43$, and the best proven performance with a practical decoding algorithm for all $ΞΈ\in (0,1)$. We also give a converse result showing that the DD algorithm is optimal for these designs when $ΞΈ> 1/2$.
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