Performance of group testing algorithms with near-constant tests-per-item

November 21, 2016 Β· Declared Dead Β· πŸ› IEEE Transactions on Information Theory

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Authors Oliver Johnson, Matthew Aldridge, Jonathan Scarlett arXiv ID 1612.07122 Category cs.IT: Information Theory Cross-listed math.PR Citations 75 Venue IEEE Transactions on Information Theory Last Checked 5 months ago
Abstract
We consider the nonadaptive group testing with N items, of which $K = Θ(N^θ)$ are defective. We study a test design in which each item appears in nearly the same number of tests. For each item, we independently pick L tests uniformly at random with replacement, and place the item in those tests. We analyse the performance of these designs with simple and practical decoding algorithms in a range of sparsity regimes, and show that the performance is consistently improved in comparison with standard Bernoulli designs. We show that our new design requires 23% fewer tests than a Bernoulli design when paired with the simple decoding algorithms known as COMP and DD. This gives the best known nonadaptive group testing performance for $θ> 0.43$, and the best proven performance with a practical decoding algorithm for all $θ\in (0,1)$. We also give a converse result showing that the DD algorithm is optimal for these designs when $θ> 1/2$.
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