A hardness result and new algorithm for the longest common palindromic subsequence problem
December 22, 2016 Β· Declared Dead Β· π Information Processing Letters
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Authors
Shunsuke Inenaga, Heikki HyyrΓΆ
arXiv ID
1612.07475
Category
cs.DS: Data Structures & Algorithms
Citations
18
Venue
Information Processing Letters
Last Checked
3 months ago
Abstract
The 2-LCPS problem, first introduced by Chowdhury et al. [Fundam. Inform., 129(4):329-340, 2014], asks one to compute (the length of) a longest palindromic common subsequence between two given strings $A$ and $B$. We show that the 2-LCPS problem is at least as hard as the well-studied longest common subsequence problem for four strings (the 4-LCS problem). Then, we present a new algorithm which solves the 2-LCPS problem in $O(ΟM^2 + n)$ time, where $n$ denotes the length of $A$ and $B$, $M$ denotes the number of matching positions between $A$ and $B$, and $Ο$ denotes the number of distinct characters occurring in both $A$ and $B$. Our new algorithm is faster than Chowdhury et al.'s sparse algorithm when $Ο= o(\log^2n \log\log n)$.
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