Perivascular Spaces Segmentation in Brain MRI Using Optimal 3D Filtering
April 25, 2017 Β· Declared Dead Β· π Scientific Reports
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Authors
Lucia Ballerini, Ruggiero Lovreglio, Maria del C. Valdes-Hernandez, Joel Ramirez, Bradley J. MacIntosh, Sandra E. Black, Joanna M. Wardlaw
arXiv ID
1704.07699
Category
cs.CV: Computer Vision
Citations
127
Venue
Scientific Reports
Last Checked
4 months ago
Abstract
Perivascular Spaces (PVS) are a recently recognised feature of Small Vessel Disease (SVD), also indicating neuroinflammation, and are an important part of the brain's circulation and glymphatic drainage system. Quantitative analysis of PVS on Magnetic Resonance Images (MRI) is important for understanding their relationship with neurological diseases. In this work, we propose a segmentation technique based on the 3D Frangi filtering for extraction of PVS from MRI. Based on prior knowledge from neuroradiological ratings of PVS, we used ordered logit models to optimise Frangi filter parameters in response to the variability in the scanner's parameters and study protocols. We optimized and validated our proposed models on two independent cohorts, a dementia sample (N=20) and patients who previously had mild to moderate stroke (N=48). Results demonstrate the robustness and generalisability of our segmentation method. Segmentation-based PVS burden estimates correlated with neuroradiological assessments (Spearman's $Ο$ = 0.74, p $<$ 0.001), suggesting the great potential of our proposed method
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