Two Results on Slime Mold Computations
July 20, 2017 Β· Declared Dead Β· π Theoretical Computer Science
"No code URL or promise found in abstract"
Evidence collected by the PWNC Scanner
Authors
Ruben Becker, Vincenzo Bonifaci, Andreas Karrenbauer, Pavel Kolev, Kurt Mehlhorn
arXiv ID
1707.06631
Category
cs.DS: Data Structures & Algorithms
Cross-listed
math.DS,
math.OC,
physics.bio-ph
Citations
14
Venue
Theoretical Computer Science
Last Checked
3 months ago
Abstract
We present two results on slime mold computations. In wet-lab experiments (Nature'00) by Nakagaki et al. the slime mold Physarum polycephalum demonstrated its ability to solve shortest path problems. Biologists proposed a mathematical model, a system of differential equations, for the slime's adaption process (J. Theoretical Biology'07). It was shown that the process convergences to the shortest path (J. Theoretical Biology'12) for all graphs. We show that the dynamics actually converges for a much wider class of problems, namely undirected linear programs with a non-negative cost vector. Combinatorial optimization researchers took the dynamics describing slime behavior as an inspiration for an optimization method and showed that its discretization can $\varepsilon$-approximately solve linear programs with positive cost vector (ITCS'16). Their analysis requires a feasible starting point, a step size depending linearly on $\varepsilon$, and a number of steps with quartic dependence on $\mathrm{opt}/(\varepsilonΦ)$, where $Φ$ is the difference between the smallest cost of a non-optimal basic feasible solution and the optimal cost ($\mathrm{opt}$). We give a refined analysis showing that the dynamics initialized with any strongly dominating point converges to the set of optimal solutions. Moreover, we strengthen the convergence rate bounds and prove that the step size is independent of $\varepsilon$, and the number of steps depends logarithmically on $1/\varepsilon$ and quadratically on $\mathrm{opt}/Φ$.
Community Contributions
Found the code? Know the venue? Think something is wrong? Let us know!
π Similar Papers
In the same crypt β Data Structures & Algorithms
π
π
The Cartographer
R.I.P.
π»
Ghosted
Route Planning in Transportation Networks
R.I.P.
π»
Ghosted
Near-linear time approximation algorithms for optimal transport via Sinkhorn iteration
R.I.P.
π»
Ghosted
Hierarchical Clustering: Objective Functions and Algorithms
R.I.P.
π»
Ghosted
Graph Isomorphism in Quasipolynomial Time
π
π
The Cartographer
Simulation optimization: A review of algorithms and applications
Died the same way β π» Ghosted
R.I.P.
π»
Ghosted
Federated Learning: Strategies for Improving Communication Efficiency
R.I.P.
π»
Ghosted
In-Datacenter Performance Analysis of a Tensor Processing Unit
R.I.P.
π»
Ghosted
Deep Convolutional Neural Networks for Computer-Aided Detection: CNN Architectures, Dataset Characteristics and Transfer Learning
R.I.P.
π»
Ghosted