The compressions of reticulation-visible networks are tree-child
June 20, 2018 Β· Declared Dead Β· π J. Comput. Biol.
"No code URL or promise found in abstract"
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Authors
Andreas D. M. Gunawan, Hongwei Yan, Louxin Zhang
arXiv ID
1806.07625
Category
cs.DS: Data Structures & Algorithms
Cross-listed
q-bio.PE
Citations
10
Venue
J. Comput. Biol.
Last Checked
4 months ago
Abstract
Rooted phylogenetic networks are rooted acyclic digraphs. They are used to model complex evolution where hybridization, recombination and other reticulation events play important roles. A rigorous definition of network compression is introduced on the basis of the recent studies of the relationships between cluster, tree and rooted phylogenetic network. The concept reveals another interesting connection between the two well-studied network classes|tree-child networks and reticulation-visible networks|and enables us to define a new class of networks for which the cluster containment problem has a linear-time algorithm.
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