Spherical Harmonic Residual Network for Diffusion Signal Harmonization

August 05, 2018 Β· Declared Dead Β· πŸ› Computational Diffusion MRI

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Authors Simon Koppers, Luke Bloy, Jeffrey I. Berman, Chantal M. W. Tax, J. Christopher Edgar, Dorit Merhof arXiv ID 1808.01595 Category cs.CV: Computer Vision Cross-listed cs.LG Citations 37 Venue Computational Diffusion MRI Last Checked 6 months ago
Abstract
Diffusion imaging is an important method in the field of neuroscience, as it is sensitive to changes within the tissue microstructure of the human brain. However, a major challenge when using MRI to derive quantitative measures is that the use of different scanners, as used in multi-site group studies, introduces measurement variability. This can lead to an increased variance in quantitative metrics, even if the same brain is scanned. Contrary to the assumption that these characteristics are comparable and similar, small changes in these values are observed in many clinical studies, hence harmonization of the signals is essential. In this paper, we present a method that does not require additional preprocessing, such as segmentation or registration, and harmonizes the signal based on a deep learning residual network. For this purpose, a training database is required, which consist of the same subjects, scanned on different scanners. The results show that harmonized signals are significantly more similar to the ground truth signal compared to no harmonization, but also improve in comparison to another deep learning method. The same effect is also demonstrated in commonly used metrics derived from the diffusion MRI signal.
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