Learning to Summarize Radiology Findings

September 12, 2018 ยท Entered Twilight ยท ๐Ÿ› Louhi@EMNLP

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Repo contents: .gitignore, LICENSE, README.md, data, dataset, download.sh, eval.py, model, prepare_vocab.py, pretrained, run.py, train.py, utils

Authors Yuhao Zhang, Daisy Yi Ding, Tianpei Qian, Christopher D. Manning, Curtis P. Langlotz arXiv ID 1809.04698 Category cs.CL: Computation & Language Citations 133 Venue Louhi@EMNLP Repository https://github.com/yuhaozhang/summarize-radiology-findings โญ 83 Last Checked 1 month ago
Abstract
The Impression section of a radiology report summarizes crucial radiology findings in natural language and plays a central role in communicating these findings to physicians. However, the process of generating impressions by summarizing findings is time-consuming for radiologists and prone to errors. We propose to automate the generation of radiology impressions with neural sequence-to-sequence learning. We further propose a customized neural model for this task which learns to encode the study background information and use this information to guide the decoding process. On a large dataset of radiology reports collected from actual hospital studies, our model outperforms existing non-neural and neural baselines under the ROUGE metrics. In a blind experiment, a board-certified radiologist indicated that 67% of sampled system summaries are at least as good as the corresponding human-written summaries, suggesting significant clinical validity. To our knowledge our work represents the first attempt in this direction.
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