Group Testing: An Information Theory Perspective

February 15, 2019 Β· Declared Dead Β· πŸ› Foundations and Trends in Communications and Information Theory

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Authors Matthew Aldridge, Oliver Johnson, Jonathan Scarlett arXiv ID 1902.06002 Category cs.IT: Information Theory Cross-listed cs.DM, math.PR, math.ST Citations 306 Venue Foundations and Trends in Communications and Information Theory Last Checked 3 months ago
Abstract
The group testing problem concerns discovering a small number of defective items within a large population by performing tests on pools of items. A test is positive if the pool contains at least one defective, and negative if it contains no defectives. This is a sparse inference problem with a combinatorial flavour, with applications in medical testing, biology, telecommunications, information technology, data science, and more. In this monograph, we survey recent developments in the group testing problem from an information-theoretic perspective. We cover several related developments: efficient algorithms with practical storage and computation requirements, achievability bounds for optimal decoding methods, and algorithm-independent converse bounds. We assess the theoretical guarantees not only in terms of scaling laws, but also in terms of the constant factors, leading to the notion of the {\em rate} of group testing, indicating the amount of information learned per test. Considering both noiseless and noisy settings, we identify several regimes where existing algorithms are provably optimal or near-optimal, as well as regimes where there remains greater potential for improvement. In addition, we survey results concerning a number of variations on the standard group testing problem, including partial recovery criteria, adaptive algorithms with a limited number of stages, constrained test designs, and sublinear-time algorithms.
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