A Novel Loss Function Incorporating Imaging Acquisition Physics for PET Attenuation Map Generation using Deep Learning
September 03, 2019 Β· Declared Dead Β· π International Conference on Medical Image Computing and Computer-Assisted Intervention
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Authors
Luyao Shi, John A. Onofrey, Enette Mae Revilla, Takuya Toyonaga, David Menard, Jo-seph Ankrah, Richard E. Carson, Chi Liu, Yihuan Lu
arXiv ID
1909.01394
Category
eess.IV: Image & Video Processing
Cross-listed
cs.CV,
cs.LG,
physics.med-ph
Citations
31
Venue
International Conference on Medical Image Computing and Computer-Assisted Intervention
Last Checked
3 months ago
Abstract
In PET/CT imaging, CT is used for PET attenuation correction (AC). Mismatch between CT and PET due to patient body motion results in AC artifacts. In addition, artifact caused by metal, beam-hardening and count-starving in CT itself also introduces inaccurate AC for PET. Maximum likelihood reconstruction of activity and attenuation (MLAA) was proposed to solve those issues by simultaneously reconstructing tracer activity ($Ξ»$-MLAA) and attenuation map ($ΞΌ$-MLAA) based on the PET raw data only. However, $ΞΌ$-MLAA suffers from high noise and $Ξ»$-MLAA suffers from large bias as compared to the reconstruction using the CT-based attenuation map ($ΞΌ$-CT). Recently, a convolutional neural network (CNN) was applied to predict the CT attenuation map ($ΞΌ$-CNN) from $Ξ»$-MLAA and $ΞΌ$-MLAA, in which an image-domain loss (IM-loss) function between the $ΞΌ$-CNN and the ground truth $ΞΌ$-CT was used. However, IM-loss does not directly measure the AC errors according to the PET attenuation physics, where the line-integral projection of the attenuation map ($ΞΌ$) along the path of the two annihilation events, instead of the $ΞΌ$ itself, is used for AC. Therefore, a network trained with the IM-loss may yield suboptimal performance in the $ΞΌ$ generation. Here, we propose a novel line-integral projection loss (LIP-loss) function that incorporates the PET attenuation physics for $ΞΌ$ generation. Eighty training and twenty testing datasets of whole-body 18F-FDG PET and paired ground truth $ΞΌ$-CT were used. Quantitative evaluations showed that the model trained with the additional LIP-loss was able to significantly outperform the model trained solely based on the IM-loss function.
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