Unsupervised Medical Image Segmentation with Adversarial Networks: From Edge Diagrams to Segmentation Maps

November 12, 2019 Β· Entered Twilight Β· πŸ› arXiv.org

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Repo contents: LICENSE, MRCNN.py, README.md, UNet_segmentation.py, VAE.py, dcrf.py, derm_workflow.py, isic_steps, kidney_workflow.py, sample_images

Authors Umaseh Sivanesan, Luis H. Braga, Ranil R. Sonnadara, Kiret Dhindsa arXiv ID 1911.05140 Category eess.IV: Image & Video Processing Cross-listed cs.AI, cs.CV, cs.LG Citations 15 Venue arXiv.org Repository https://github.com/kiretd/Unsupervised-MIseg ⭐ 20 Last Checked 2 months ago
Abstract
We develop and approach to unsupervised semantic medical image segmentation that extends previous work with generative adversarial networks. We use existing edge detection methods to construct simple edge diagrams, train a generative model to convert them into synthetic medical images, and construct a dataset of synthetic images with known segmentations using variations on extracted edge diagrams. This synthetic dataset is then used to train a supervised image segmentation model. We test our approach on a clinical dataset of kidney ultrasound images and the benchmark ISIC 2018 skin lesion dataset. We show that our unsupervised approach is more accurate than previous unsupervised methods, and performs reasonably compared to supervised image segmentation models. All code and trained models are available at https://github.com/kiretd/Unsupervised-MIseg.
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