Robust Classification of High-Dimensional Spectroscopy Data Using Deep Learning and Data Synthesis

March 26, 2020 ยท Declared Dead ยท ๐Ÿ› Journal of Chemical Information and Modeling

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Authors James Houston, Frank G. Glavin, Michael G. Madden arXiv ID 2003.11842 Category cs.LG: Machine Learning Cross-listed cs.CV, cs.NE, stat.ML Citations 48 Venue Journal of Chemical Information and Modeling Last Checked 6 months ago
Abstract
This paper presents a new approach to classification of high dimensional spectroscopy data and demonstrates that it outperforms other current state-of-the art approaches. The specific task we consider is identifying whether samples contain chlorinated solvents or not, based on their Raman spectra. We also examine robustness to classification of outlier samples that are not represented in the training set (negative outliers). A novel application of a locally-connected neural network (NN) for the binary classification of spectroscopy data is proposed and demonstrated to yield improved accuracy over traditionally popular algorithms. Additionally, we present the ability to further increase the accuracy of the locally-connected NN algorithm through the use of synthetic training spectra and we investigate the use of autoencoder based one-class classifiers and outlier detectors. Finally, a two-step classification process is presented as an alternative to the binary and one-class classification paradigms. This process combines the locally-connected NN classifier, the use of synthetic training data, and an autoencoder based outlier detector to produce a model which is shown to both produce high classification accuracy, and be robust to the presence of negative outliers.
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